A Phase 1b/2 Trial of the Safety and Microbiological Activity of Bacteriophage Therapy in Cystic Fibrosis Subjects Colonized With Pseudomonas Aeruginosa

Sponsor

National Institute of Allergy and Infectious Diseases (NIAID) (NIH)

Overall Status

Recruiting

CT.gov ID

NCT05453578

Collaborator

(none)

Enrollment

Locations

Arms

28.5

Anticipated Duration (Months)

4.8

Patients Per Site

0.2

Patients Per Site Per Month

Study Details

Study Description

Brief Summary

This is a phase 1b/2 study of a single dose of intravenous (IV) bacteriophage in males and non-pregnant females, at least 18 years old, diagnosed with Cystic Fibrosis (CF). This clinical trial is designed to assess the safety and microbiological activity of bacteriophage product WRAIR_PAM-CF1, directed at Pseudomonas aeruginosa in clinically stable CF individuals chronically colonized with P. aeruginosa. WRAIR_PAM-CF1 is a 4 component anti-pseudomonal bacteriophage mixture containing between 4 x 10^{7 and 4 x 10}9 Plaque Forming Units (PFU) of bacteriophage. Enrollment will occur at up to 20 clinical sites in the United States. In stage 1, two eligible subjects will be assigned to each of the three dosing arms receiving a single dosage of the IV bacteriophage therapy (4 x 10^{7 PFU, 4 x 10}8 PFU, and 4 x 10^{9 PFU;
total of 6 sentinel subjects), followed by 30 ± 7 days observation period. If no SAEs
(related to the study product) are identified during the 96 hours after bacteriophage
administration for all Sentinel Subjects in Stage 1, the study will proceed to Stage 2. In
Stage 2a, 32 subjects will be enrolled into one of 4 arms (placebo IV, 4 x 10}7 PFU, 4 x 10^{8
PFU, and 4 x 10}9 PFU) in a 1:1:1:1 allocation. An interim analysis will be performed after all subjects have completed follow up visit 5 on Day 30 to select the IV bacteriophage dose with the most favorable safety and microbiological activity profile. During Stage 2b, subjects will be randomized into the bacteriophage (dose selected based on Interim Analysis following Stage 2a) or placebo arm. The final sample size is expected to be up to 72 subjects total with up to 25 subjects in the placebo arm and up to 25 subjects in the Stage 2b bacteriophage dose.

Condition or Disease	Intervention/Treatment	Phase
Bacterial Disease Carrier Cystic Fibrosis	Other: Placebo Biological: WRAIR_PAM-CF1	Phase 1/Phase 2

Detailed Description

This is a phase 1b/2, multicenter, randomized placebo-controlled double-blind study of a single dose of intravenous (IV) bacteriophage in males and non-pregnant females, at least 18 years old, diagnosed with Cystic Fibrosis (CF). This clinical trial is designed to assess the safety and microbiological activity of bacteriophage product WRAIR_PAM-CF1, directed at P. aeruginosa in clinically stable CF individuals chronically colonized with P. aeruginosa. WRAIR_PAM-CF1 is a 4 component anti-pseudomonal bacteriophage mixture containing between 4 x 10^{7 and 4 x 10}9 Plaque Forming Units (PFU) of bacteriophage. Enrollment will occur at up to 20 clinical sites in the United States. In stage 1, two sentinel subjects will be assigned to each of the three dosing arms receiving a single dosage of the IV bacteriophage therapy (4 x 10^{7 PFU, 4 x 10}8 PFU, and 4 x 10^{9 PFU; total of 6 sentinel subjects), followed by 30 ± 7
days observation period. If no SAEs (related to the study product) are identified during the
96 hours after bacteriophage administration for all Sentinel Subjects in Stage 1, the study
will proceed to Stage 2. In Stage 2a, 32 subjects will be enrolled into one of 4 arms
(placebo IV, 4 x 10}7 PFU, 4 x 10^{8 PFU, and 4 x 10}9 PFU) in a 1:1:1:1 allocation. An interim analysis will be performed after all subjects have completed follow up visit 5 on Day 30 to select the IV bacteriophage dose with the most favorable safety and microbiological activity profile. During Stage 2b, subjects will be randomized into the bacteriophage (dose selected based on Interim Analysis following Stage 2a) or placebo arm. The final sample size is expected to be up to 72 subjects total with up to 25 subjects in the placebo arm and up to 25 subjects in the Stage 2b bacteriophage dose. The primary objectives of this study are to

describe the safety of a single dose of IV bacteriophage therapy in clinically stable CF subjects with P. aeruginosa in expectorated sputum; 2) describe the microbiological activity of a single dose of IV bacteriophage therapy in clinically stable adult CF subjects with P. aeruginosa in expectorated sputum; 3) describe the benefit to risk profile of a single dose of IV bacteriophage therapy in clinically stable CF subjects with P. aeruginosa in expectorated sputum.

Study Design

Study Type:

Interventional

Anticipated Enrollment :

72 participants

Allocation:

Randomized

Intervention Model:

Sequential Assignment

Masking:

Double (Participant, Investigator)

Primary Purpose:

Treatment

Official Title:

A Phase 1b/2, Multi-Centered, Randomized, Double-Blind, Placebo-Controlled Trial of the Safety and Microbiological Activity of a Single Dose of Bacteriophage Therapy in Cystic Fibrosis Subjects Colonized With Pseudomonas Aeruginosa

Anticipated Study Start Date :

Sep 16, 2022

Anticipated Primary Completion Date :

Jan 31, 2024

Anticipated Study Completion Date :

Jan 31, 2025

Arms and Interventions

Arm	Intervention/Treatment
Active Comparator: Stage 1/2a Arm 2 4x10^7 plaque forming units (PFU) of WRAIR_PAM-CF1 administered intravenously with approximately 25 mL of 0.9 percent Sodium Chloride saline solution for 30 mins as a single dosage. Stage 1: N=2 (sentinel subjects); Stage 2a: N=8	Biological: WRAIR_PAM-CF1 Bacteriophage combination composed of the following four bacteriophages: PaWRA01Phi11, PaWRA01Phi39, PaWRA02Phi83, and PaWRA02Phi87
Active Comparator: Stage 1/2a Arm 3 4x10^8 plaque forming units (PFU) of WRAIR_PAM-CF1 administered intravenously with approximately 25 mL of 0.9 percent Sodium Chloride saline solution for 30 mins as a single dosage. Stage 1: N=2 (sentinel subjects); Stage 2a: N=8	Biological: WRAIR_PAM-CF1 Bacteriophage combination composed of the following four bacteriophages: PaWRA01Phi11, PaWRA01Phi39, PaWRA02Phi83, and PaWRA02Phi87
Active Comparator: Stage 1/2a Arm 4 4x10^9 plaque forming units (PFU) of WRAIR_PAM-CF1 administered intravenously with approximately 25 mL of 0.9 percent Sodium Chloride saline solution for 30 mins as a single dosage. Stage 1: N=2 (sentinel subjects); Stage 2a: N=8	Biological: WRAIR_PAM-CF1 Bacteriophage combination composed of the following four bacteriophages: PaWRA01Phi11, PaWRA01Phi39, PaWRA02Phi83, and PaWRA02Phi87
Placebo Comparator: Stage 2a Arm 1 25 mL of 0.9 percent Sodium Chloride saline solution administered intravenously for 30 mins as a single dosage. N=8	Other: Placebo 0.9 percent sodium chloride
Placebo Comparator: Stage 2b Arm 1 25 mL of 0.9 percent Sodium Chloride saline solution administered intravenously for 30 mins as a single dosage. N=17	Other: Placebo 0.9 percent sodium chloride
Active Comparator: Stage 2b Arm 2 WRAIR_PAM-CF1 concentration determined after post stage 2a analysis, administered intravenously with 25 mL of 0.9 percent Sodium Chloride saline solution for 30 mins as a single dosage. N=17	Biological: WRAIR_PAM-CF1 Bacteriophage combination composed of the following four bacteriophages: PaWRA01Phi11, PaWRA01Phi39, PaWRA02Phi83, and PaWRA02Phi87

Outcome Measures

Primary Outcome Measures

Change from baseline in log10 P. aeruginosa total colony counts in quantitative sputum cultures [Day 1 through Day 30]
Desirability of Outcome Ranking (DOOR) [Day 1 through Day 8]
Rank 1 (more desirable): No serious adverse events (SAE) (related to study product) and > 2 log10 reduction in P. aeruginosa colony forming units (CFU)/mL; Rank 2: No SAE (related to study product) and 1-2 log10 reduction in P. aeruginosa CFU/mL; Rank 3: No SAE (related to study product) and <1 log10 reduction in P. aeruginosa CFU/mL; Rank 4 (less desirable): SAE (related to study product)
Number of grade 2 or higher treatment-emergent Adverse Events [Day 1 through Day 30 ± 7]

Eligibility Criteria

Criteria

Ages Eligible for Study:

18 Years to 99 Years

Sexes Eligible for Study:

All

Accepts Healthy Volunteers:

Inclusion Criteria:

Subjects must meet all the inclusion criteria to be eligible to participate in the study:

Adult (>/= 18 years) at the time of screening.
Confirmed CF diagnosis based on a compatible clinical syndrome confirmed by either an abnormal sweat chloride testing or two CFTR gene variations.*

*Can be obtained from documentation in medical records; actual test results not necessary.

Able to produce at least 2 mL of sputum during a 30-minute sputum collection following a hypertonic saline treatment or other approach to increase sputum production.*

**Determined by investigator or their designee judgement. Approaches for obtaining sputum may include, but are not limited to, inhaled hypertonic saline (e.g. 3%, 7%, or 10%), inhaled hypertonic bicarbonate, inhaled mannitol, or spontaneously expectorated sputum. The same approach should be used for all sputum collections for a given subject, refer to the Manual of procedures for further details.

1. aeruginosa (regardless of Colony Forming Units (CFU)/mL) isolated from a sputum, throat culture, or other respiratory specimen in the past 12 months.
Confirmed P. aeruginosa isolation from a sample of expectorated sputum at the screening visit.
Capable of providing informed consent.
Capable and willing to complete all study visits and perform all procedures required by this protocol.

Exclusion Criteria:

Subjects who meet any of the exclusion criteria will not be enrolled in the study:

Body weight < 30 kg.
Forced Expiratory Volume 1 second < 20% of predicted value at screening, using the Hankinson equations.
Elevated LFTs obtained at screening.*

*a. Alanine aminotransferase (ALT) > 5 x the upper limit of normal (ULN) or aspartate transaminase (AST) > 5 x ULN or total bilirubin > 3 x ULN, OR b. Total bilirubin > 1.5 x ULN combined with either ALT > 3 x ULN or AST > 3 x ULN. ULN reflects local laboratory ranges.

Acute clinical illness requiring a new (oral, parenteral), or inhaled antibiotic(s)</= 30 days prior to the baseline visit.*

*Does not include chronic suppressive medications or cyclic dosing medications such as inhaled antibiotics.

Women who are pregnant, planning to become pregnant during the study period, or breastfeeding.* Women of childbearing potential must have a negative serum human chorionic gonadotropin test during screening and agree to use an effective method of contraception for the duration of the trial.

*A female is considered of childbearing potential unless postmenopausal, or surgically sterilized and at least 3 months has passed since sterilization procedure.

Female surgical sterilization procedures include tubal ligation, bilateral salpingectomy, hysterectomy, or bilateral oophorectomy
Female is considered postmenopausal if she is >45 years old and has gone at least 12 months without a spontaneous menstrual period without other known or suspected cause.
Effective methods of contraception include (a) abstinence, (b) partner vasectomy, (c) intrauterine devices, (d) hormonal implants (such as Implanon), or (e) other hormonal methods (birth control pills, injections, patches, vaginal rings).
Active treatment of any nontuberculous mycobacteria or fungal organisms </=30 days prior to baseline. Chronic treatment for suppression of fungal populations is allowable.
Anticipated need to change chronic antibiotic regimens during the study period.*

*Subjects on cyclic dosing medications such as inhaled antibiotics, must be able and express willingness to keep the therapies at the time of screening constant for the duration of the follow-up period (approximately 30 days). Subjects on chronic suppressive antimicrobial therapy must be able and express willingness to stay on the therapies for the duration of their follow-up period. This includes chronic azithromycin therapy.

Known allergy to any component of the study product.
Any significant finding that, in the opinion of the investigator, would make it unsafe for the subject to participate in this study.
Enrolled in a clinical trial within </=30 days of the baseline/dosing visit, or participating in a clinical trial while enrolled in this clinical trial (inclusive of prophylactic vaccine trials).
Currently or previously enrolled in this trial.

Contacts and Locations

Locations

	Site	City	State	Country	Postal Code
1	University of California, San Diego	La Jolla	California	United States	92037
2	University of California Davis Health	Sacramento	California	United States	95816
3	Stanford University	Stanford	California	United States	94305
4	University of South Florida/Tampa General Hospital	Tampa	Florida	United States	22612
5	Emory University	Atlanta	Georgia	United States	30324
6	University of Iowa	Iowa City	Iowa	United States	52242
7	Johns Hopkins University	Baltimore	Maryland	United States	21205
8	Michigan Medicine	Ann Arbor	Michigan	United States	48109
9	University of Minnesota Medical Center	Minneapolis	Minnesota	United States	55455-0341
10	Washington University School of Medicine in St. Louis	Saint Louis	Missouri	United States	63110
11	Duke University Medical Center	Durham	North Carolina	United States	27710
12	Case Western Reserve University	Cleveland	Ohio	United States	44106
13	UPMC Children's Hospital of Pittsburgh/University of Pittsburgh	Pittsburgh	Pennsylvania	United States	15213
14	University of Texas Southwestern Medical Center	Dallas	Texas	United States	75390
15	Medical College of Wisconsin	Milwaukee	Wisconsin	United States	53226