Clofarabine for Myelodysplastic Syndrome (MDS) Patients Who Failed Vidaza Treatment (tx)

Sponsor
Texas Oncology Cancer Center (Industry)
Overall Status
Terminated
CT.gov ID
NCT00700011
Collaborator
Genzyme, a Sanofi Company (Industry)
10
1
2
24
0.4

Study Details

Study Description

Brief Summary

The investigators hypothesize that, in addition to its apoptotic effect, clofarabine induces DNA hypomethylation. If the investigators' hypothesis is correct, findings from the present proposal will not only contribute to information relating to the mechanisms of action of clofarabine but also provide the opportunity for combined epigenetic targeting of MDS using clofarabine with either another hypomethylating agent or a histone deacetylase inhibitor.

Clofarabine has demonstrated anti-cancer activity through inhibition of DNA synthesis and repair, induction of apoptosis, and possibly through other mechanisms. Numerous responses have been observed after treatment with clofarabine in heavily pre-treated relapsed/refractory patients with ALL, AML and high risk MDS.

In the present proposal, the investigators will study the clinical and laboratory effects of 2 different dosages of clofarabine in patients who have failed the hypomethylating agent, 5-azacytidine. This study will recruit patients who have received at least six cycles of 5-azacytidine without response or whose disease has progressed or relapsed while on 5-azacytidine. The first cohort of patients will receive clofarabine 10 mg/m2/day for five days and the second cohort of patients 5 mg/m2/day for five days, both every four to six weeks. The investigators will determine the frequency of response to the two dosages of nucleoside analog in this group of patients. Measurement of responses will include improvement in the peripheral blood count, reduction in the blood and platelet transfusion need and eradication of cytogenetically abnormal clones. Successful completion of this study will define the position of clofarabine in MDS in the era of epigenetic targeting.

Condition or Disease Intervention/Treatment Phase
Phase 2

Detailed Description

Study Overview

This study will recruit patients who have received at least six cycles of 5-azacytidine without response or whose disease has progressed or relapsed while on 5-azacytidine. The first cohort of patients will receive clofarabine 10 mg/m2/day for five days and the second cohort of patients 5 mg/m2/day for five days, both every four to six weeks. The investigators will determine the frequency of response to the two dosages of nucleoside analog in this group of patients. Measurement of responses will include improvement in the peripheral blood count, reduction in the blood and platelet transfusion need and eradication of cytogenetically abnormal clones.

  • Primary Objectives
  1. To determine the frequency and duration of peripheral blood responses to IV clofarabine in MDS patients who have failed 5-azacytidine

  2. To determine the frequency and duration of bone marrow responses to IV clofarabine, including CR + PR

  • Secondary Objectives

To determine whether clofarabine exhibits a DNA hypomethylating property

Study Design

Study Type:
Interventional
Actual Enrollment :
10 participants
Allocation:
Non-Randomized
Intervention Model:
Single Group Assignment
Masking:
None (Open Label)
Primary Purpose:
Treatment
Official Title:
A Pilot Study of IV Clofarabine for Patients With Myelodysplastic Syndrome Who Have Failed 5-azacytidine
Study Start Date :
Mar 1, 2008
Actual Primary Completion Date :
Mar 1, 2010
Actual Study Completion Date :
Mar 1, 2010

Arms and Interventions

Arm Intervention/Treatment
Active Comparator: 10 mg/m2 group

Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities.

Drug: Clofarabine
10 mg/m2 x 5 days per 4 to 6 week cycles
Other Names:
  • Clolar
  • Active Comparator: 5 mg/m2 group

    Patients were treated with Clofarabine 5 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities.

    Drug: Clofarabine
    5 mg/m2 x 5 days per 4 to 6 week cycles
    Other Names:
  • Clolar
  • Outcome Measures

    Primary Outcome Measures

    1. Improvement in Peripheral Blood Count and Reduction in Number of Transfusions [2-3 months]

      Hematologic improvement will be an increased Hemoglobin of 1.5 g/dL or a reduction in the need for PRBC transfusions by at least 4 units over an 8 week period, at least 100% increase and an ANC of >0.5 x 10^9/L and an absolut platelet count increase of >30 x 10^9/L for patients who start at > 20 x 10^9/L, or increase from <20 x 10^9/L to >20 x 10^9/L and by at least 100%.

    2. Determine Frequency and Duration of Bone Marrow Responses to IV Clofarabine [2-3 months]

      The International Working Group response criteria was used. Complete remission is defined as <5 % marrow blasts without evidence of dysplasia and normalization of the peripheral blood counts, including hemoglobin >11 g/dL, neutrophil count of >1 x 10^9/L. and platelet count of >100 x 10^9/L. Patients must also be transfusion-independent and not require any recombinant erythropoietin. Partial remission (PR) is defined as: satisfying complete remission criteria if abnormal before treatment, except that blasts are reduced by 50% or more compared to pretreatment levels, but still >5 %. Stable disease is defined as: failure to achieve at least a PR but without evidence of disease progression for at least 8 weeks.Progression of disease is defined as: disease progression with worsening cytopenias. Best response of these patients is used in the determination for this outcome below.

    3. To Determine the Non-hematologic Toxicity Profile of This Dose Schedule (Grade 2 and Above) [biweekly for duration of treatment , an average of 3 months]

      Assess for adverse events in all the patients receiving the Clofarabine at the dose schedules described in the protocol (CTCAE 3.0 used).

    Secondary Outcome Measures

    1. Number of Participants With DNA Hypomethylation During the Study [assessed twice per cycle]

      Since we previously observed decreases in DNA methylation in tumor cells after in vitro treatment with Clofarabine, we compared the long interspersednuclear element-1 methylation of genomic DNA obtained from CD3-depletedperipheral blood mononuclear cells between day 1 and day 5 of each cycle of Clofarabine.

    Eligibility Criteria

    Criteria

    Ages Eligible for Study:
    18 Years and Older
    Sexes Eligible for Study:
    All
    Accepts Healthy Volunteers:
    No
    Inclusion Criteria:
    • Patients with MDS of any risk group who have, just immediately prior to being entered into this study, already received at least six cycles of 5-azacytidine and have failed, either due to no response or to disease relapse despite being still on 5-azacytidine, or patients whose MDS has progressed while on 5-azacytidine, irrespective of the number of cycles the patient has received. We have specifically chosen to be very stringent about our patient population in order to address our question of whether clofarabine can be used to salvage patients who have failed 5-azacytidine with only a small patient population, i.e. 10 patients in each cohort.

    • ECOG Performance status of 0 - 2

    • Recombinant erythropoietin is allowed, if the patients are already receiving erythropoietin. G-CSF can be given during the neutropenic stage following therapy since this would not affect evaluation of response because the response will be made based on CBC and bone marrow changes upon recovery from clofarabine.

    • Patients must have been at least four weeks after the last course of 5-azacytidine

    • Age over 18 years

    • Have adequate renal and hepatic functions as indicated by the following laboratory values:

    • Serum creatinine 1.0 mg/dL; if serum creatinine 1.0 mg/dL, then the estimated glomerular filtration rate (GFR) must be 60 mL/min/1.73 m2 as calculated by the Modification of Diet in Renal Disease equation where Predicted GFR (ml/min/1.73 m2) = 186 x (Serum Creatinine)-1.154 x (age in years)-0.023 x (0.742 if patient is female) x (1.212 if patient is black)

    • Serum bilirubin ≤1.5 mg/dL × upper limit of normal (ULN)

    • Aspartate transaminase (AST)/alanine transaminase (ALT) 2.5 × ULN

    • Alkaline phosphatase 2.5 × ULN

    • Capable of understanding the investigational nature, potential risks and benefits of the study, and able to provide signed informed consent.

    • Female patients of childbearing potential must have a negative serum pregnancy test within 2 weeks prior to enrollment.

    • Male and female patients must use an effective contraceptive method during the study and for a minimum of 6 months after study treatment.

    Exclusion Criteria:
    • Nursing or pregnant women

    • Prior clofarabine therapy

    • Life expectancy of less than 3 months due to other intercurrent illness.

    • Current concomitant chemotherapy, radiation therapy, or immunotherapy other than as specified in the protocol.

    • Use of investigational agents within 30 days or any anticancer therapy within 4 weeks before study entry with the exception of hydroxyurea. The patient must have recovered from all acute toxicities from any previous therapy.

    • Have any other severe concurrent disease, or have a history of serious organ dysfunction or disease involving the heart, kidney, liver, or other organ system that may place the patient at undue risk to undergo treatment.

    • Patients with a systemic fungal, bacterial, viral, or other infection not controlled (defined as exhibiting ongoing signs/symptoms related to the infection and without improvement, despite appropriate antibiotics or other treatment).

    • Any significant concurrent disease, illness, or psychiatric disorder that would compromise patient safety or compliance, interfere with consent, study participation, follow up, or interpretation of study results.

    Contacts and Locations

    Locations

    Site City State Country Postal Code
    1 Texas Oncology Cancer Center Amarillo Texas United States 79106

    Sponsors and Collaborators

    • Texas Oncology Cancer Center
    • Genzyme, a Sanofi Company

    Investigators

    • Principal Investigator: Seah Lim, MD, Texas Oncology Cancer Center

    Study Documents (Full-Text)

    None provided.

    More Information

    Additional Information:

    Publications

    None provided.
    Responsible Party:
    Seah Lim M.D., Principal Investigator, Texas Oncology Cancer Center
    ClinicalTrials.gov Identifier:
    NCT00700011
    Other Study ID Numbers:
    • iCLO111
    First Posted:
    Jun 18, 2008
    Last Update Posted:
    Mar 15, 2013
    Last Verified:
    Mar 1, 2013
    Keywords provided by Seah Lim M.D., Principal Investigator, Texas Oncology Cancer Center
    Additional relevant MeSH terms:

    Study Results

    Participant Flow

    Recruitment Details The recruitment period started 3/24/08 (date of consent of the first patient), to 4/8/10 which was the date IRB lists as date of study closure. All patients were consented and treated at our clinic, Texas Oncology - Amarillo. Eight patients were treated to the 10 mg/m2 arm and two patients to the 5 mg/m2 arm. Study closed due to poor recruitment.
    Pre-assignment Detail There were no screen fails due to pre-screening thoroughly. The plan was to sign eight patients to the 10 mg/m2 arm and then eight to the 5 mg/m2 arm, but recuitment was difficult and decision was made to close study in early 2010, so only two patients were assigned to 5 mg/m2 arm.
    Arm/Group Title 10 mg/m2 Group 5 mg/m2 Group
    Arm/Group Description Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities. Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities.
    Period Title: Overall Study
    STARTED 8 2
    COMPLETED 8 1
    NOT COMPLETED 0 1

    Baseline Characteristics

    Arm/Group Title 10 mg/m2 Group 5 mg/m2 Group Total
    Arm/Group Description Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities. Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities. Total of all reporting groups
    Overall Participants 8 2 10
    Age (Count of Participants)
    <=18 years
    0
    0%
    0
    0%
    0
    0%
    Between 18 and 65 years
    0
    0%
    0
    0%
    0
    0%
    >=65 years
    8
    100%
    2
    100%
    10
    100%
    Age (years) [Mean (Standard Deviation) ]
    Mean (Standard Deviation) [years]
    73.38
    (4.10357)
    77.5
    (0.707)
    74.2
    (4.022)
    Sex: Female, Male (Count of Participants)
    Female
    4
    50%
    0
    0%
    4
    40%
    Male
    4
    50%
    2
    100%
    6
    60%
    Region of Enrollment (participants) [Number]
    United States
    8
    100%
    2
    100%
    10
    100%

    Outcome Measures

    1. Primary Outcome
    Title Improvement in Peripheral Blood Count and Reduction in Number of Transfusions
    Description Hematologic improvement will be an increased Hemoglobin of 1.5 g/dL or a reduction in the need for PRBC transfusions by at least 4 units over an 8 week period, at least 100% increase and an ANC of >0.5 x 10^9/L and an absolut platelet count increase of >30 x 10^9/L for patients who start at > 20 x 10^9/L, or increase from <20 x 10^9/L to >20 x 10^9/L and by at least 100%.
    Time Frame 2-3 months

    Outcome Measure Data

    Analysis Population Description
    All patients considered for analysis except for one on the 5 mg/m2 arm who died within 2 weeks after cycle one making this unassessable for that patient.
    Arm/Group Title 10 mg/m2 Group 5 mg/m2 Group
    Arm/Group Description Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities. Patients were treated with Clofarabine 5 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities.
    Measure Participants 8 1
    Number [participants]
    3
    37.5%
    1
    50%
    2. Secondary Outcome
    Title Number of Participants With DNA Hypomethylation During the Study
    Description Since we previously observed decreases in DNA methylation in tumor cells after in vitro treatment with Clofarabine, we compared the long interspersednuclear element-1 methylation of genomic DNA obtained from CD3-depletedperipheral blood mononuclear cells between day 1 and day 5 of each cycle of Clofarabine.
    Time Frame assessed twice per cycle

    Outcome Measure Data

    Analysis Population Description
    All participants were considered except one patient on 5 mg/m2 arm who died within 2 weeks after cycle 1, so this was unassessable.
    Arm/Group Title 10 mg/m2 Group 5 mg/m2 Group
    Arm/Group Description Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities. Patients were treated with Clofarabine 5 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities.
    Measure Participants 8 1
    Number [participants]
    2
    25%
    0
    0%
    3. Primary Outcome
    Title Determine Frequency and Duration of Bone Marrow Responses to IV Clofarabine
    Description The International Working Group response criteria was used. Complete remission is defined as <5 % marrow blasts without evidence of dysplasia and normalization of the peripheral blood counts, including hemoglobin >11 g/dL, neutrophil count of >1 x 10^9/L. and platelet count of >100 x 10^9/L. Patients must also be transfusion-independent and not require any recombinant erythropoietin. Partial remission (PR) is defined as: satisfying complete remission criteria if abnormal before treatment, except that blasts are reduced by 50% or more compared to pretreatment levels, but still >5 %. Stable disease is defined as: failure to achieve at least a PR but without evidence of disease progression for at least 8 weeks.Progression of disease is defined as: disease progression with worsening cytopenias. Best response of these patients is used in the determination for this outcome below.
    Time Frame 2-3 months

    Outcome Measure Data

    Analysis Population Description
    All patients considered except one on the 5 mg/m2 arm who we didn't have enough time to assess response as he died within 2 weeks after receiving cycle 1.
    Arm/Group Title 10 mg/m2 Group 5 mg/m2 Group
    Arm/Group Description Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities. Patients were treated with Clofarabine 5 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities.
    Measure Participants 8 1
    complete remission
    1
    12.5%
    0
    0%
    partial remission
    1
    12.5%
    0
    0%
    stable disease
    4
    50%
    1
    50%
    progressive disease
    2
    25%
    0
    0%
    4. Primary Outcome
    Title To Determine the Non-hematologic Toxicity Profile of This Dose Schedule (Grade 2 and Above)
    Description Assess for adverse events in all the patients receiving the Clofarabine at the dose schedules described in the protocol (CTCAE 3.0 used).
    Time Frame biweekly for duration of treatment , an average of 3 months

    Outcome Measure Data

    Analysis Population Description
    All participants considered.
    Arm/Group Title 10 mg/m2 Group 5 mg/m2 Group
    Arm/Group Description Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities. Patients were treated with Clofarabine 5 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities.
    Measure Participants 8 2
    Fatigue
    4
    50%
    1
    50%
    Mucositis
    1
    12.5%
    1
    50%
    Vomiting
    2
    25%
    1
    50%
    Nausea
    2
    25%
    1
    50%
    Hyperbilirubinemia
    1
    12.5%
    1
    50%
    Dehydration
    1
    12.5%
    1
    50%
    Rash
    1
    12.5%
    0
    0%
    ALT elevation
    1
    12.5%
    0
    0%
    AST elevation
    1
    12.5%
    0
    0%
    Dyspnea
    0
    0%
    1
    50%
    Dizziness
    1
    12.5%
    0
    0%
    Headache
    1
    12.5%
    0
    0%
    Pulmonary edema
    0
    0%
    1
    50%

    Adverse Events

    Time Frame Adverse events were collected up to 28 days post last dose, but were followed by Dr Lim to death or lost to follow up and if any adverse events were assessed to be related to the Clofarabine they were to be added to the list collected for study.
    Adverse Event Reporting Description
    Arm/Group Title 10 mg/m2 Group 5 mg/m2 Group
    Arm/Group Description Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities. Patients were treated with Clofarabine 10 mg/m2 daily x 5 days per cycle. Cycles were intended on being every 28 days but this was flexible due to the bone marrow neding to recover from each cycle before strting the next one. Neulasta was given on day 5 of each cycle. Patients were treated until disease progression, or intolerable toxicities.
    All Cause Mortality
    10 mg/m2 Group 5 mg/m2 Group
    Affected / at Risk (%) # Events Affected / at Risk (%) # Events
    Total / (NaN) / (NaN)
    Serious Adverse Events
    10 mg/m2 Group 5 mg/m2 Group
    Affected / at Risk (%) # Events Affected / at Risk (%) # Events
    Total 6/8 (75%) 2/2 (100%)
    Blood and lymphatic system disorders
    Thrombocytopenia 2/8 (25%) 2 2/2 (100%) 4
    Hemorrhage - Nosebleed 1/8 (12.5%) 1 0/2 (0%) 0
    Neutropenia 1/8 (12.5%) 1 0/2 (0%) 0
    Gastrointestinal disorders
    Dehydration 1/8 (12.5%) 1 0/2 (0%) 0
    Infections and infestations
    Infection w/ a Grade 3-4 ANC 4/8 (50%) 6 1/2 (50%) 2
    Infection w/ Normal ANC 1/8 (12.5%) 2 0/2 (0%) 0
    Infection w/ Grade 1-2 ANC 1/8 (12.5%) 1 0/2 (0%) 0
    Investigations
    Infection - Skin (cellulitis) 1/8 (12.5%) 1 0/2 (0%) 0
    Respiratory, thoracic and mediastinal disorders
    Pneumonia 1/8 (12.5%) 1 0/2 (0%) 0
    Pulmonary Infiltrates 1/8 (12.5%) 1 0/2 (0%) 0
    Other (Not Including Serious) Adverse Events
    10 mg/m2 Group 5 mg/m2 Group
    Affected / at Risk (%) # Events Affected / at Risk (%) # Events
    Total 8/8 (100%) 2/2 (100%)
    Gastrointestinal disorders
    Mucositis 1/8 (12.5%) 3 1/2 (50%) 1
    Vomiting 3/8 (37.5%) 3 0/2 (0%) 0
    Nausea 3/8 (37.5%) 3 0/2 (0%) 0
    Hyperbilirubinemia 1/8 (12.5%) 1 1/2 (50%) 1
    Dehydration 1/8 (12.5%) 1 1/2 (50%) 1
    General disorders
    Fatigue 4/8 (50%) 6 1/2 (50%) 1
    Headache 1/8 (12.5%) 1 0/2 (0%) 0
    Metabolism and nutrition disorders
    ALT elevation 1/8 (12.5%) 1 0/2 (0%) 0
    AST 1/8 (12.5%) 1 0/2 (0%) 0
    Nervous system disorders
    Dizziness 1/8 (12.5%) 1 0/2 (0%) 0
    Respiratory, thoracic and mediastinal disorders
    Dyspnea 0/8 (0%) 0 1/2 (50%) 1
    Pulmonary edema 0/8 (0%) 0 1/2 (50%) 1
    Skin and subcutaneous tissue disorders
    Rash 1/8 (12.5%) 1 0/2 (0%) 0

    Limitations/Caveats

    [Not Specified]

    More Information

    Certain Agreements

    Principal Investigators are NOT employed by the organization sponsoring the study.

    There is NOT an agreement between Principal Investigators and the Sponsor (or its agents) that restricts the PI's rights to discuss or publish trial results after the trial is completed.

    Results Point of Contact

    Name/Title Dr. Seah Lim
    Organization Texas Oncology - Amarillo
    Phone 806-358-8654
    Email seah.lim@usoncology.com
    Responsible Party:
    Seah Lim M.D., Principal Investigator, Texas Oncology Cancer Center
    ClinicalTrials.gov Identifier:
    NCT00700011
    Other Study ID Numbers:
    • iCLO111
    First Posted:
    Jun 18, 2008
    Last Update Posted:
    Mar 15, 2013
    Last Verified:
    Mar 1, 2013