EPSO: Optimization of Sampling and Processing of Samples for Molecular Microbial Research on Ocular Surface Samples
Study Details
Study Description
Brief Summary
The use of anesthetics and the processing of the retrieved samples are major confounding factors that influence the results of microbiome research.
Condition or Disease | Intervention/Treatment | Phase |
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N/A |
Detailed Description
The use of anesthetics is subject of discussion in ocular surface microbiome research. One publication showed a significant lower alpha diversity when using an anesthetic. However, the diluting effect of the anesthetic drop itself was not accounted for. On the other hand, using anesthetics will enable patients to tolerate sampling better and this might allow better sampling. To analyze the effect of anesthetic drops on the composition of the ocular surface microbiome, we sampled volunteers undergoing general anesthesia. By using artificial tears as a control, we aimed at accounting for the diluting effect of the anesthetic. By using volunteers under general anesthesia, we wanted to assure similar pressure with or without topical anesthesia since the executor was not influenced by the patient's reaction.
Furthermore, the effect of different extraction protocols on sequencing results will be assessed by sampling different volunteers in both eyes on non consecutive days.
Study Design
Arms and Interventions
Arm | Intervention/Treatment |
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Placebo Comparator: Drop of artificial tears A drop op Thealoz duo |
Diagnostic Test: Conjunctival swab
Swab of the conjunctival fornices of both eyes
Drug: artificial tears
One drop of artificial tears in the other eye
Other Names:
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Active Comparator: Drop op anesthetic A drop of oxybuprocaïne |
Diagnostic Test: Conjunctival swab
Swab of the conjunctival fornices of both eyes
Drug: Oxybuprocaine Hydrochloride 0.4% Eye Drops
One drop of topical anesthesia in one eye
Other Names:
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Outcome Measures
Primary Outcome Measures
- Difference in richness of the microbial flora measured as operational taxonomic units [5 minutes per sampling session]
The difference in richness and evenness of distribution of the microbial flora of samples retrieved after a drop of topical anesthesia versus samples retrieved after a drop of artificial tears.
- Difference in evenness of distribution of the microbial flora measured as operational taxonomic units [5 minutes per sampling session]
The effect of the different microbial DNA extraction protocols on the richness and evenness of distribution of the microbial flora of the ocular surface will be compared.
Eligibility Criteria
Criteria
Inclusion Criteria:
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Willing to undergo sampling of the conjunctiva
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Fluent in written and verbal Dutch
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Capable of giving informed consent
Exclusion Criteria:
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Allergy to oxybuprocaine
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Medication usage in one eye only
Contacts and Locations
Locations
Site | City | State | Country | Postal Code | |
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1 | University Hospitals Leuven, Department of Ophthalmology | Leuven | Belgium | 3000 |
Sponsors and Collaborators
- Universitaire Ziekenhuizen Leuven
Investigators
- Principal Investigator: Heleen Delbeke, MD, Universitaire Ziekenhuizen Leuven
Study Documents (Full-Text)
More Information
Publications
None provided.- S62672