Cagablea: RNA Sequencing of Individual Versus Wastewater - SARS-CoV2
Study Details
Study Description
Brief Summary
The aim is to compare the percentage of the different SARS-CoV2 lineages that are detected in wastewater samples with matched clinical samples. About 1,400 swab samples from patients living in Nice were tested by Biogroup between Oct 19th and Oct 23rd (Week 43 of 2020). The sequence of 81 PCR positive samples, corresponding to all samples that were unambiguously assigned to one of the wastewater catchment areas and their lineage was determined. These values were compared to values measured in wastewater.
Condition or Disease | Intervention/Treatment | Phase |
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Study Design
Arms and Interventions
Arm | Intervention/Treatment |
---|---|
PCR positive samples that are positive for the detection of SARS-CoV2. The SARS-CoV2 sequence of positive samples is provided, together with an indication about patient's neigborhood, corresponding to one of the 21 different spots which wastewater was analyzed |
Other: NO INTERVENTION
No INTERVENTION
|
PCR negative samples that are p negative for the detection of SARS-CoV2. T |
Other: NO INTERVENTION
No INTERVENTION
|
Outcome Measures
Primary Outcome Measures
- RTqPCR result [1 month]
positive ou negative result to SAR-Cov2
- SARS-CoV2 sequence [1 month]
analyse of SARS-CoV2 sequence (in the case of positive samples)
Eligibility Criteria
Criteria
Inclusion Criteria:
- whole population tested in Nice during W43 of 2020
Exclusion Criteria:
- none
Contacts and Locations
Locations
Site | City | State | Country | Postal Code | |
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1 | Nice Hospital | Nice | France | 06000 | |
2 | Ipmc . Cnrs | Sophia Antipolis | France | 06 |
Sponsors and Collaborators
- Centre Hospitalier Universitaire de Nice
- Centre National de la Recherche Scientifique, France
Investigators
None specified.Study Documents (Full-Text)
None provided.More Information
Publications
None provided.- 21DSP-IPMC01